############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/siggenes_1.66.0.tar.gz && rm -rf siggenes.buildbin-libdir && mkdir siggenes.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=siggenes.buildbin-libdir siggenes_1.66.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL siggenes_1.66.0.zip && rm siggenes_1.66.0.tar.gz siggenes_1.66.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 857k 100 857k 0 0 2508k 0 --:--:-- --:--:-- --:--:-- 2514k install for i386 * installing *source* package 'siggenes' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'siggenes' finding HTML links ... done EBAM-class html FindA0-class html SAM-class html chisq.ebam html chisq.stat html d.stat html delta.plot html denspr html ebam html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/siggenes.buildbin-libdir/00LOCK-siggenes/00new/siggenes/help/ebam.html ebamControl html find.a0 html findDelta html fudge2 html fuzzy.ebam html help.ebam html help.finda0 html help.sam html limma2sam html link.genes html link.siggenes html list.siggenes html md.plot html nclass.wand html pi0.est html plotArguments html plotFindArguments html qvalue.cal html rowWilcoxon html sam html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/siggenes.buildbin-libdir/00LOCK-siggenes/00new/siggenes/help/sam.html sam.plot2 html samControl html siggenes-internal html siggenes2excel html siggenes2html html sumSAM-class html trend.ebam html trend.stat html wilc.ebam html wilc.stat html z.ebam html ** building package indices ** installing vignettes 'siggenes.Rnw' ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'siggenes' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'siggenes' as siggenes_1.66.0.zip * DONE (siggenes) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'siggenes' successfully unpacked and MD5 sums checked