############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf karyoploteR.buildbin-libdir && mkdir karyoploteR.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=karyoploteR.buildbin-libdir karyoploteR_1.18.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'karyoploteR' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'karyoploteR' finding HTML links ... done addGeneNames html autotrack html colByCategory html colByChr html colByRegion html colByValue html darker html filterParams html findIntersections html getChromosomeNamesBoundingBox html getColorSchemas html getCytobandColors html getCytobands html finding level-2 HTML links ... done getDataPanelBoundingBox html getDefaultPlotParams html getMainTitleBoundingBox html getTextSize html getVariantsColors html horizonColors html is.color html kpAbline html kpAddBaseNumbers html kpAddChromosomeNames html kpAddChromosomeSeparators html kpAddColorRect html kpAddCytobandLabels html kpAddCytobands html kpAddCytobandsAsLine html kpAddLabels html kpAddMainTitle html kpArea html kpArrows html kpAxis html kpBars html kpDataBackground html kpHeatmap html kpLines html kpPlotBAMCoverage html kpPlotBAMDensity html kpPlotBigWig html kpPlotCoverage html kpPlotDensity html kpPlotGenes html kpPlotHorizon html kpPlotLinks html kpPlotLoess html kpPlotManhattan html kpPlotMarkers html kpPlotNames html kpPlotRainfall html kpPlotRegions html kpPlotRibbon html kpPlotTranscripts html kpPoints html kpPolygon html kpRect html kpSegments html kpText html lighter html makeGenesDataFromTxDb html mergeTranscripts html plotDefaultPlotParams html plotKaryotype html plotPalettes html prepareParameters2 html prepareParameters4 html processClipping html transparent html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'karyoploteR' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'karyoploteR' as karyoploteR_1.18.0.zip * DONE (karyoploteR)