############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/graphite_1.38.0.tar.gz && rm -rf graphite.buildbin-libdir && mkdir graphite.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=graphite.buildbin-libdir graphite_1.38.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL graphite_1.38.0.zip && rm graphite_1.38.0.tar.gz graphite_1.38.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 90 459k 90 415k 0 0 895k 0 --:--:-- --:--:-- --:--:-- 895k 100 459k 100 459k 0 0 915k 0 --:--:-- --:--:-- --:--:-- 916k install for i386 * installing *source* package 'graphite' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'graphite' finding HTML links ... done Pathway-class html PathwayList-class html Pathways-class html as.list.PathwayList html buildPathway html convertIdentifiers html cytoscapePlot html finding level-2 HTML links ... done pathwayDatabases html pathwayGraph html pathways html prepareSPIA html runClipper html runSPIA html runTopologyGSA html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'graphite' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'graphite' as graphite_1.38.0.zip * DONE (graphite) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'graphite' successfully unpacked and MD5 sums checked