############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/TIN_1.24.0.tar.gz && rm -rf TIN.buildbin-libdir && mkdir TIN.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TIN.buildbin-libdir TIN_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL TIN_1.24.0.zip && rm TIN_1.24.0.tar.gz TIN_1.24.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 3 4577k 3 160k 0 0 554k 0 0:00:08 --:--:-- 0:00:08 555k 45 4577k 45 2078k 0 0 1645k 0 0:00:02 0:00:01 0:00:01 1645k 100 4577k 100 4577k 0 0 2124k 0 0:00:02 0:00:02 --:--:-- 2125k install for i386 * installing *source* package 'TIN' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading The following object is masked _by_ package:aroma.affymetrix: writeCdf The following object is masked from package:R.utils: findFiles ** help *** installing help indices converting help for package 'TIN' finding HTML links ... done aberrantExonUsage html clusterPlot html correlation html correlationPlot html firmaAnalysis html geneAnnotation html geneSetCorrelation html geneSets html posNegCorrPlot html probesetPermutations html readGeneSummaries html sampleSetFirmaScores html sampleSetGeneSummaries html scatterPlot html splicingFactors html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location The following object is masked _by_ package:aroma.affymetrix: writeCdf The following object is masked from package:R.utils: findFiles ** testing if installed package can be loaded from final location The following object is masked _by_ package:aroma.affymetrix: writeCdf The following object is masked from package:R.utils: findFiles ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'TIN' ... ** testing if installed package can be loaded The following object is masked _by_ package:aroma.affymetrix: writeCdf The following object is masked from package:R.utils: findFiles * MD5 sums packaged installation of 'TIN' as TIN_1.24.0.zip * DONE (TIN) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'TIN' successfully unpacked and MD5 sums checked