############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/GenomeInfoDb_1.28.4.tar.gz && rm -rf GenomeInfoDb.buildbin-libdir && mkdir GenomeInfoDb.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GenomeInfoDb.buildbin-libdir GenomeInfoDb_1.28.4.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL GenomeInfoDb_1.28.4.zip && rm GenomeInfoDb_1.28.4.tar.gz GenomeInfoDb_1.28.4.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 3090k 100 3090k 0 0 4836k 0 --:--:-- --:--:-- --:--:-- 4844k install for i386 * installing *source* package 'GenomeInfoDb' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'GenomeInfoDb' finding HTML links ... done GenomeDescription-class html GenomeInfoDb-internals html Seqinfo-class html fetchExtendedChromInfoFromUCSC html getChromInfoFromEnsembl html getChromInfoFromNCBI html getChromInfoFromUCSC html loadTaxonomyDb html mapGenomeBuilds html rankSeqlevels html seqinfo html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/GenomeInfoDb.buildbin-libdir/00LOCK-GenomeInfoDb/00new/GenomeInfoDb/help/seqinfo.html seqlevels-wrappers html seqlevelsStyle html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'GenomeInfoDb' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'GenomeInfoDb' as GenomeInfoDb_1.28.4.zip * DONE (GenomeInfoDb) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'GenomeInfoDb' successfully unpacked and MD5 sums checked