############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/FEAST_1.0.0.tar.gz && rm -rf FEAST.buildbin-libdir && mkdir FEAST.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=FEAST.buildbin-libdir FEAST_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL FEAST_1.0.0.zip && rm FEAST_1.0.0.tar.gz FEAST_1.0.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 5 2919k 5 155k 0 0 738k 0 0:00:03 --:--:-- 0:00:03 739k 83 2919k 83 2428k 0 0 1959k 0 0:00:01 0:00:01 --:--:-- 1959k 100 2919k 100 2919k 0 0 1593k 0 0:00:01 0:00:01 --:--:-- 1593k install for i386 * installing *source* package 'FEAST' ... ** using staged installation ** libs "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I"c:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c cal_3_metrics.c -o cal_3_metrics.o C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o FEAST.dll tmp.def cal_3_metrics.o -Lc:/extsoft/lib/i386 -Lc:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/FEAST.buildbin-libdir/00LOCK-FEAST/00new/FEAST/libs/i386 ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'FEAST' finding HTML links ... done Consensus html FEAST html FEAST_fast html Norm_Y html Purity html SC3_Clust html Select_Model_short_SC3 html Select_Model_short_TSCAN html Seurat_Clust html TSCAN_Clust html Visual_Rslt html Y html align_CellType html cal_F2 html cal_Fisher2 html cal_MSE html cal_metrics html eval_Cluster html process_Y html trueclass html vector2matrix html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'FEAST' ... ** libs "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c cal_3_metrics.c -o cal_3_metrics.o C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o FEAST.dll tmp.def cal_3_metrics.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/FEAST.buildbin-libdir/FEAST/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'FEAST' as FEAST_1.0.0.zip * DONE (FEAST) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'FEAST' successfully unpacked and MD5 sums checked