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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/BgeeCall_1.8.0.tar.gz && rm -rf BgeeCall.buildbin-libdir && mkdir BgeeCall.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BgeeCall.buildbin-libdir BgeeCall_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL BgeeCall_1.8.0.zip && rm BgeeCall_1.8.0.tar.gz BgeeCall_1.8.0.zip
###
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 14 5798k   14  816k    0     0  2070k      0  0:00:02 --:--:--  0:00:02 2071k
 92 5798k   92 5380k    0     0  3817k      0  0:00:01  0:00:01 --:--:-- 3818k
100 5798k  100 5798k    0     0  3904k      0  0:00:01  0:00:01 --:--:-- 3904k

install for i386

* installing *source* package 'BgeeCall' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'BgeeCall'
    finding HTML links ... done
    AbundanceMetadata-class                 html  
    BgeeCall                                html  
    BgeeMetadata-class                      html  
    KallistoMetadata-class                  html  
    UserMetadata-class                      html  
    create_kallisto_index                   html  
    download_fasta_intergenic               html  
    download_kallisto                       html  
    generate_calls_workflow                 html  
    generate_presence_absence               html  
    generate_slurm_calls                    html  
    generate_slurm_indexes                  html  
    getIntergenicPrefix                     html  
    getIntergenicRelease                    html  
    getRunIds                               html  
    getSimpleArborescence                   html  
    getWorkingPath                          html  
    get_summary_stats                       html  
    list_bgee_ref_intergenic_species        html  
    list_community_ref_intergenic_species   html  
    list_intergenic_release                 html  
    merge_transcriptome_and_intergenic      html  
    merging_libraries                       html  
    run_kallisto                            html  
    run_tximport                            html  
    setAnnotationFromFile                   html  
    setAnnotationFromObject                 html  
    setIntergenicRelease                    html  
    setOutputDir                            html  
    setRNASeqLibPath                        html  
    setRunIds                               html  
    setSimpleArborescence                   html  
    setTranscriptomeFromFile                html  
    setTranscriptomeFromObject              html  
    setWorkingPath                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'BgeeCall' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'BgeeCall' as BgeeCall_1.8.0.zip
* DONE (BgeeCall)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'BgeeCall' successfully unpacked and MD5 sums checked