############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/BatchQC_1.20.0.tar.gz && rm -rf BatchQC.buildbin-libdir && mkdir BatchQC.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BatchQC.buildbin-libdir BatchQC_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL BatchQC_1.20.0.zip && rm BatchQC_1.20.0.tar.gz BatchQC_1.20.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 1264k 100 1264k 0 0 2402k 0 --:--:-- --:--:-- --:--:-- 2408k install for i386 * installing *source* package 'BatchQC' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'BatchQC' finding HTML links ... done BatchQCout-class html batchQC html batchQC_analyze html batchQC_condition_adjusted html batchQC_filter_genes html batchQC_fsva_adjusted html batchQC_num.sv html batchQC_shapeVariation html batchQC_sva html batchQC_svregress_adjusted html batchqc_circosplot html batchqc_correlation html batchqc_corscatter html batchqc_explained_variation html batchqc_heatmap html batchqc_pc_explained_variation html batchqc_pca html batchqc_pca_svd html batchtest html combatPlot html example_batchqc_data html getShinyInput html getShinyInputCombat html getShinyInputOrig html getShinyInputSVA html getShinyInputSVAf html getShinyInputSVAr html gnormalize html lmFitC html log2CPM html makeSVD html pcRes html plotPC html plot_genewise_moments html plot_samplewise_moments html protein_example_data html rnaseq_sim html setShinyInput html setShinyInputCombat html setShinyInputOrig html setShinyInputSVA html setShinyInputSVAf html setShinyInputSVAr html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'BatchQC' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'BatchQC' as BatchQC_1.20.0.zip * DONE (BatchQC) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'BatchQC' successfully unpacked and MD5 sums checked