semisup
This is the development version of semisup; for the stable release version, see semisup.
Semi-Supervised Mixture Model
Bioconductor version: Development (3.20)
Implements a parametric semi-supervised mixture model. The permutation test detects markers with main or interactive effects, without distinguishing them. Possible applications include genome-wide association analysis and differential expression analysis.
Author: Armin Rauschenberger [aut, cre]
Maintainer: Armin Rauschenberger <armin.rauschenberger at uni.lu>
citation("semisup")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("semisup")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("semisup")
article frame | HTML | |
vignette frame | HTML | |
vignette source | R Script | |
Reference Manual | ||
NEWS | Text |
Details
biocViews | Classification, Clustering, DNASeq, Genetics, GenomicVariation, Microarray, MultipleComparison, SNP, Software, SomaticMutation |
Version | 1.29.0 |
In Bioconductor since | BioC 3.5 (R-3.4) (7.5 years) |
License | GPL-3 |
Depends | R (>= 3.0.0) |
Imports | VGAM |
System Requirements | |
URL | https://github.com/rauschenberger/semisup |
Bug Reports | https://github.com/rauschenberger/semisup/issues |
See More
Suggests | knitr, testthat, SummarizedExperiment |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | semisup_1.29.0.tar.gz |
Windows Binary | semisup_1.29.0.zip (64-bit only) |
macOS Binary (x86_64) | semisup_1.29.0.tgz |
macOS Binary (arm64) | semisup_1.29.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/semisup |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/semisup |
Bioc Package Browser | https://code.bioconductor.org/browse/semisup/ |
Package Short Url | https://bioconductor.org/packages/semisup/ |
Package Downloads Report | Download Stats |