Package: BSgenome.Sscrofa.UCSC.susScr3
Title: Full genome sequences for Sus scrofa (UCSC version susScr3)
Description: Full genome sequences for Sus scrofa (Pig) as provided by UCSC (susScr3, Aug. 2011) and stored in Biostrings objects.
Version: 1.4.2
organism: Sus scrofa
common_name: Pig
provider: UCSC
provider_version: susScr3
release_date: Aug. 2011
release_name: Swine Genome Sequencing Consortium Sscrofa10.2
source_url: http://hgdownload.soe.ucsc.edu/goldenPath/susScr3/bigZips/
organism_biocview: Sus_scrofa
BSgenomeObjname: Sscrofa
seqnames: paste0("chr", c(1:18, "X", "Y", "M"))
circ_seqs: "chrM"
mseqnames: "unplaced_scaffolds"
SrcDataFiles: susScr3.fa.gz from http://hgdownload.soe.ucsc.edu/goldenPath/susScr3/bigZips/
PkgExamples: genome$chr1  # same as genome[["chr1"]]
seqs_srcdir: /fh/fast/morgan_m/BioC/BSgenomeForge/srcdata/BSgenome.Sscrofa.UCSC.susScr3/seqs