genomationData

Experimental data for showing functionalities of the genomation package


Bioconductor version: Release (3.20)

The package contains Chip Seq, Methylation and Cage data, downloaded from Encode

Author: Altuna Akalin, Vedran Franke

Maintainer: Vedran Franke <vedran.franke at gmail.com>

Citation (from within R, enter citation("genomationData")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("genomationData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("genomationData")
genomationData PDF R Script
Reference Manual PDF

Details

biocViews ChIPSeqData, ChipOnChipData, ENCODE, ExperimentData, Genome, SequencingData, StemCell
Version 1.38.0
License GPL-3
Depends
Imports
System Requirements
URL
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Suggests knitr
Linking To
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Depends On Me
Imports Me
Suggests Me genomation
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package genomationData_1.38.0.tar.gz
Windows Binary (x86_64)
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/genomationData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/genomationData
Package Short Url https://bioconductor.org/packages/genomationData/
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