• 0.1 Overview
  • 0.2 Installing VERSO
  • 0.3 Debug

0.1 Overview

VERSO is an algorithmic framework that processes variants profiles from viral samples, to produce phylogenetic models of viral evolution from clonal variants and to subsequently quantify the intra-host genomic diversity of samples. VERSO includes two separate and subsequent steps; in this repository we provide an R implementation of VERSO STEP 1.

0.2 Installing VERSO

The R version of VERSO can be installed from Bioconductor. To do so, we need to install the R packages VERSO depends on and the devtools package.

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("VERSO")

0.3 Debug

Please feel free to contact us if you have problems running our tool at or .