Changes in version 1.21.2 (2020-04-21)
o update coExp for R4.0 due to Matrix is now Array.
Changes in version 1.18.0 (2020-02-25)
o dotplot shows gene number and -log2(q-value) heatmapPEI.
o update vignettes using rmarkdown v2.
o update gene sets and rename gene sets name.
o update AllGeneSymbol using gene symbols from
https://www.genenames.org/ (accessed at Feb. 26, 2020)
Changes in version 1.15.1 (2018-05-30)
o add dotplot in heatmapPEI and vignettes
o multi-group labelling
Changes in version 1.5.2 (2016-03-31)
o update vignette
Changes in version 1.5.1 (2015-10-30)
o add gmtlist2file function
Changes in version 1.5.0 (2015-10-14)
o Bioconductor 3.2 Dev
Changes in version 1.4.0 (2015-10-14)
o Bioconductor 3.2
Changes in version 1.2.0 (2015-09-01)
o update exmaple dataset.
o add drug repositioning gene sets and anlaysis.
Changes in version 1.1.6 (2015-07-14)
o debug cutree.
o values are -log2(FDR) in heatmapPEI instead of -log(FDR).
Changes in version 1.1.5 (2015-07-14)
o redesign cogena.
o add coExp and clEnrich as a substitute for the original cogena
function.
o update vignette
o add tests
o add PPIinfo and hubGene funtions, delete PPIenrichment,
netInCluster and plotPPI
Changes in version 1.1.4 (2015-07-09)
o add PPIenrichment function.
o debug pCluster function.
Changes in version 1.1.3 (2015-06-25)
o add heatmapEnrich, plotPPI and netInCluster functions.
o sampleColor randomly in heatmapCluster.
Changes in version 1.1.1 (2015-04-27)
o add Molecular Signatures Database v5.0.
o import mclust instead of suggesting it.
Changes in version 1.0.0 (2015-04-16)
o cogena is released with Bioconductor 3.1.
Changes in version 0.99.3 (2015-04-02)
o use makeCluster to creat cluster to avoid checking error from
Windows.
Changes in version 0.99.2 (2015-04-01)
o Update indent based on the coding style of Bioconductor.
o Trim long line.
Changes in version 0.99.1 (2015-03-31)
o Add runnable examples for functions.
o Update R version dependency from 2.10 to 3.2.
o Add non-empty value sections for some functions.
Changes in version 0.99.0 (2015-03-27)
o Submit cogena to Bioconductor.