stjudem
This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.
This package is for version 3.18 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see stjudem.
Microarray Data from Yeoh et al. in MACAT format
Bioconductor version: 3.18
This is a microarray data set on acute lymphoblastic leukemia, published in 2002 (Yeoh et al.Cancer Cell 2002). The experiments were conducted in the St.Jude Children's Research Hospital, Memphis, Tenessee, USA. The raw data was preprocessed by variance stabilizing normalization (Huber et al.) on probe and subsequent summarization of probe expression values into probe set expression values using median polish.
Author: Benjamin Georgi, Matthias Heinig, Sebastian Schmeier, Joern Toedling
Maintainer: Joern Toedling <toedling at ebi.ac.uk>
citation("stjudem")):
Installation
To install this package, start R (version "4.3") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("stjudem")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | CancerData, ChipOnChipData, ExperimentData, LeukemiaCancerData, MicroarrayData |
| Version | 1.42.0 |
| License | LGPL (>= 2) |
| Depends | R (>= 2.10), utils |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | macat |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | stjudem_1.42.0.tar.gz |
| Windows Binary | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/stjudem |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/stjudem |
| Package Short Url | https://bioconductor.org/packages/stjudem/ |
| Package Downloads Report | Download Stats |