Terfve C, Cokelaer T, MacNamara A, Henriques D, Goncalves E, Morris MK, van Iersel M, Lauffenburger DA, Saez-Rodriguez J (2012). “CellNOptR: a flexible toolkit to train protein signaling networks to data using multiple logic formalisms.” BMC Systems Biology, 1(133).

Terfve C, Cokelaer T, MacNamara A, Saez-Rodriguez J (2022). Training of boolean logic models of signalling networks using prior knowledge networks and perturbation data. R package available on http://www.bioconductor.org/packages/release/bioc/html/CellNOptR.html.