## ---- include=TRUE, results="hide", message=FALSE, warning=FALSE-------------- library(MultiAssayExperiment) library(SingleCellMultiModal) ## ----------------------------------------------------------------------------- CITEseq(DataType="cord_blood", modes="*", dry.run=TRUE, version="1.0.0") ## ----message=FALSE------------------------------------------------------------ mse <- CITEseq( DataType="cord_blood", modes="*", dry.run=FALSE, version="1.0.0" ) mse ## ----------------------------------------------------------------------------- experiments(mse) ## ----------------------------------------------------------------------------- rownames(mse) ## ----------------------------------------------------------------------------- sampleMap(mse) ## ----------------------------------------------------------------------------- head(experiments(mse)$scRNAseq)[, 1:4] ## ----------------------------------------------------------------------------- head(experiments(mse)$scADT)[, 1:4] ## ----message=FALSE------------------------------------------------------------ sce <- CITEseq(DataType="cord_blood", modes="*", dry.run=FALSE, version="1.0.0", DataClass="SingleCellExperiment") ## ----------------------------------------------------------------------------- sessionInfo()