================================================================================ PeacoQC (version 0.99.1) ------------------------ First version of the package. ================================================================================ PeacoQC (version 0.99.2) ------------------------ Include time channel check. ================================================================================ PeacoQC (version 0.99.3) ------------------------ Made one big PeacoQC function where margins are removed, where the data is compensated and transformed and where PeacoQC signal stability is used for quality control. ================================================================================ PeacoQC (version 0.99.9) ------------------------ Changed peak detection to allow for negative peaks and modify PeacoQC function to make compensation and transformation not obligatory. ================================================================================ PeacoQC (version 0.99.10) ------------------------ Make changes to allow for better mass cytometry data cleaning. Added the remove_zeros parameter and the time_units parameter. ================================================================================ PeacoQC (version 0.99.11) ------------------------ Allow the usage of marker names instead of only allowing the indices. Change colors of PeacoQCHeatmap ================================================================================ PeacoQC (version 0.99.13) ------------------------ Improve the messages and errors ================================================================================ PeacoQC (version 0.99.15) ------------------------ Make sure that the plot can also be made if there is no time channel present in the flowframe ================================================================================ PeacoQC (version 0.99.16) ------------------------ Adapt warnings increasing and decreasing channel ================================================================================ PeacoQC (version 0.99.17) ------------------------ Split up PeacoQCSignastability in multiple functions and alter descriptions ================================================================================ PeacoQC (version 0.99.18) ------------------------ Split up PlotPeacoQC in multiple functions Alter code to suffice to Bioconductor rules Add warning to vignette that directories will be made in the working directory Remove figure from package ================================================================================ PeacoQC (version 0.99.19) ------------------------ Remove general PeacoQC function and rename PeacoQCSignalStability to PeacoQC ================================================================================ PeacoQC (version 0.99.20) ------------------------ Imported "Original_ID" column to cleaned flowframes. ================================================================================ PeacoQC (version 0.99.21) ------------------------ Removed ff error ================================================================================ PeacoQC (version 0.99.22) ------------------------ Replaced description function with keyword function of flowCore ================================================================================ PeacoQC (version 0.99.22) ------------------------ Restore 100 value ================================================================================